aquakin.CompiledModel
=====================

.. currentmodule:: aquakin

.. autoclass:: CompiledModel

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~CompiledModel.__init__
      ~CompiledModel.atol
      ~CompiledModel.check_conservation
      ~CompiledModel.check_nitrogen
      ~CompiledModel.check_units
      ~CompiledModel.composition
      ~CompiledModel.compute_stoich
      ~CompiledModel.concentrations
      ~CompiledModel.condition_defaults
      ~CompiledModel.dCdt
      ~CompiledModel.default_concentrations
      ~CompiledModel.default_conditions
      ~CompiledModel.default_parameters
      ~CompiledModel.description_of
      ~CompiledModel.influent
      ~CompiledModel.parameter_values
      ~CompiledModel.precipitation_equilibrium
      ~CompiledModel.rates
      ~CompiledModel.summary
      ~CompiledModel.to_latex
      ~CompiledModel.units_of
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~CompiledModel.clip_negative_states
      ~CompiledModel.derived_condition_fn
      ~CompiledModel.n_params
      ~CompiledModel.n_reactions
      ~CompiledModel.n_species
      ~CompiledModel.positivity_threshold
      ~CompiledModel.precipitation_equilibrium_fn
      ~CompiledModel.time_unit
      ~CompiledModel.name
      ~CompiledModel.description
      ~CompiledModel.references
      ~CompiledModel.species
      ~CompiledModel.parameters
      ~CompiledModel.conditions_required
      ~CompiledModel.stoich_matrix
      ~CompiledModel.reaction_names
      ~CompiledModel.rate_callables
      ~CompiledModel.rate_asts
      ~CompiledModel.param_index
      ~CompiledModel.species_index
      ~CompiledModel.species_units
      ~CompiledModel.species_descriptions
      ~CompiledModel.species_composition
      ~CompiledModel.parameter_units
      ~CompiledModel.condition_units
      ~CompiledModel.parameter_bounds
      ~CompiledModel.parameter_transforms
      ~CompiledModel.parameter_priors
      ~CompiledModel.stoich_dynamic
      ~CompiledModel.derived_fields
      ~CompiledModel.temperature_corrections